Gene annotation in Carrizo citrange genome shotgun Sequences
31,863 significant protein hits were identified, which is similar with rice (41,402 genes), black cottonwood (55,000 genes), and grapevine (30,434) genes.
| Index | Seq ID | Uniprot ID | E value | Annotation |
|---|---|---|---|---|
| 1301 | gnl|citrus|GI1478W01DAC1C | Q9SPD1 | 1.5863e-11 | Q9SPD1_BRAOL Acetyl-CoA carboxylase (Fragment) OS=Brassica oleracea GN=ACC-1 PE=4 SV=1 |
| 1302 | gnl|citrus|GI1478W01DAGU3 | B9R9M6 | 4.93342e-12 | B9R9M6_RICCO Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1498800 PE=4 SV=1 |
| 1303 | gnl|citrus|GI1478W01DAL4S | B9SBG7 | 3.3419e-18 | B9SBG7_RICCO Molybdopterin cofactor synthesis protein A, putative OS=Ricinus communis GN=RCOM_0717980 PE=4 SV=1 |
| 1304 | gnl|citrus|GI1478W01DALEY | B9S9R5 | 5.72144e-14 | B9S9R5_RICCO Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0521590 PE=4 SV=1 |
| 1305 | gnl|citrus|GI1478W01DALO9 | B9I866 | 4.52219e-09 | B9I866_POPTR Mitochondrial phosphate carrier protein OS=Populus trichocarpa GN=POPTRDRAFT_571621 PE=4 SV=1 |
| 1306 | gnl|citrus|GI1478W01DATWT | Q9SQV0 | 2.58563e-50 | Q9SQV0_ARATH F24P17.3 protein OS=Arabidopsis thaliana GN=At3g06470 PE=4 SV=1 |
| 1307 | gnl|citrus|GI1478W01DAXXJ | C0HHF5 | 3.88727e-24 | C0HHF5_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 |
| 1308 | gnl|citrus|GI1478W01DB05J | B9RN29 | 3.47207e-29 | B9RN29_RICCO R2r3-myb transcription factor, putative OS=Ricinus communis GN=RCOM_1343000 PE=4 SV=1 |
| 1309 | gnl|citrus|GI1478W01DB8IW | B9S5G1 | 2.14093e-06 | B9S5G1_RICCO Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1571520 PE=4 SV=1 |
| 1310 | gnl|citrus|GI1478W01DBADQ | A7UD87 | 6.94043e-12 | A7UD87_PHAVU Retinoblastoma-associated protein (Fragment) OS=Phaseolus vulgaris GN=FVE PE=4 SV=1 |
| 1311 | gnl|citrus|GI1478W01DBOHO | C6TGT0 | 2.03389e-22 | C6TGT0_SOYBN Putative uncharacterized protein OS=Glycine max PE=2 SV=1 |
| 1312 | gnl|citrus|GI1478W01DBXM7 | Q1KUV2 | 7.9138e-23 | Q1KUV2_9ROSI Putative uncharacterized protein (Fragment) OS=Cleome spinosa PE=4 SV=1 |
| 1313 | gnl|citrus|GI1478W01DC1K8 | A5BAQ8 | 8.08534e-45 | A5BAQ8_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_027913 PE=4 SV=1 |
| 1314 | gnl|citrus|GI1478W01DC2NO | B9NIQ6 | 3.49784e-25 | B9NIQ6_POPTR Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_675667 PE=4 SV=1 |
| 1315 | gnl|citrus|GI1478W01DC6EP | Q94F68 | 3.8867e-36 | Q94F68_WHEAT H+-ATPase (Fragment) OS=Triticum aestivum PE=2 SV=1 |
| 1316 | gnl|citrus|GI1478W01DC8XC | B9R880 | 2.17562e-62 | B9R880_RICCO Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_1597570 PE=4 SV=1 |
| 1317 | gnl|citrus|GI1478W01DCFB0 | A5BXX9 | 3.18351e-15 | A5BXX9_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_030226 PE=4 SV=1 |
| 1318 | gnl|citrus|GI1478W01DCHQK | B9S9W5 | 2.92009e-25 | B9S9W5_RICCO Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0522890 PE=4 SV=1 |
| 1319 | gnl|citrus|GI1478W01DCILF | Q9LI91 | 1.01841e-33 | Q9LI91_ARATH Similarity to unknown protein OS=Arabidopsis thaliana PE=4 SV=1 |
| 1320 | gnl|citrus|GI1478W01DCKFI | A5C8G3 | 2.07757e-44 | A5C8G3_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_039767 PE=4 SV=1 |
| 1321 | gnl|citrus|GI1478W01DCOPI | A9P0P7 | 1.19478e-07 | A9P0P7_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 |
| 1322 | gnl|citrus|GI1478W01DCRO8 | B9HVL9 | 7.94718e-15 | B9HVL9_POPTR Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_822023 PE=4 SV=1 |
| 1323 | gnl|citrus|GI1478W01DCSNU | B9I998 | 4.71742e-12 | B9I998_POPTR Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_774610 PE=4 SV=1 |
| 1324 | gnl|citrus|GI1478W01DCTXM | A9NM28 | 6.43973e-11 | A9NM28_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=4 SV=1 |
| 1325 | gnl|citrus|GI1478W01DCWBX | C5WZU8 | 1.18967e-09 | C5WZU8_SORBI Putative uncharacterized protein Sb01g048150 OS=Sorghum bicolor GN=Sb01g048150 PE=4 SV=1 |
| 1326 | gnl|citrus|GI1478W01DD9DK | A9P922 | 9.5571e-21 | A9P922_POPTR Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1 |
| 1327 | gnl|citrus|GI1478W01DDA6E | B9S4F2 | 9.09187e-23 | B9S4F2_RICCO WRKY transcription factor, putative OS=Ricinus communis GN=RCOM_0689800 PE=4 SV=1 |
| 1328 | gnl|citrus|GI1478W01DDCMY | Q304Y7 | 4.18806e-07 | Q304Y7_CAPAN Putative AP2/EREBP transcription factor (Fragment) OS=Capsicum annuum PE=2 SV=1 |
| 1329 | gnl|citrus|GI1478W01DDEWI | B9RQV6 | 7.21746e-13 | B9RQV6_RICCO Heat shock protein binding protein, putative OS=Ricinus communis GN=RCOM_0706790 PE=4 SV=1 |
| 1330 | gnl|citrus|GI1478W01DDG50 | B9MZD9 | 1.41083e-36 | B9MZD9_POPTR Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_294737 PE=3 SV=1 |
| 1331 | gnl|citrus|GI1478W01DDJU0 | B9I7D8 | 1.64722e-45 | B9I7D8_POPTR Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_571449 PE=3 SV=1 |
| 1332 | gnl|citrus|GI1478W01DDMJ7 | Q9SKG7 | 8.90696e-40 | Q9SKG7_ARATH Putative uncharacterized protein At2g13770 OS=Arabidopsis thaliana GN=At2g13770 PE=2 SV=1 |
| 1333 | gnl|citrus|GI1478W01DDN8N | B9I485 | 4.15212e-34 | B9I485_POPTR Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_823475 PE=4 SV=1 |
| 1334 | gnl|citrus|GI1478W01DDOI6 | B9HSY3 | 2.71062e-44 | B9HSY3_POPTR Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_726022 PE=2 SV=1 |
| 1335 | gnl|citrus|GI1478W01DDPZK | C6TAE7 | 1.47387e-30 | C6TAE7_SOYBN Putative uncharacterized protein OS=Glycine max PE=4 SV=1 |
| 1336 | gnl|citrus|GI1478W01DDQXZ | Q9FKT0 | 1.01749e-19 | ARP8_ARATH Actin-related protein 8 OS=Arabidopsis thaliana GN=ARP8 PE=2 SV=1 |
| 1337 | gnl|citrus|GI1478W01DDS7A | Q9SPC9 | 5.62982e-06 | Q9SPC9_BRANA Beta ketoacyl-ACP synthase III (Fragment) OS=Brassica napus GN=KASIII-1 PE=4 SV=1 |
| 1338 | gnl|citrus|GI1478W01DDWYM | C0P5F0 | 3.63932e-11 | C0P5F0_MAIZE Putative uncharacterized protein OS=Zea mays PE=4 SV=1 |
| 1339 | gnl|citrus|GI1478W01DDXSL | O49240 | 2.5797e-33 | O49240_ALSLI Reverse transcriptase (Fragment) OS=Alstroemeria ligtu PE=4 SV=1 |
| 1340 | gnl|citrus|GI1478W01DE7V5 | C5X8W2 | 1.21685e-06 | C5X8W2_SORBI Putative uncharacterized protein Sb02g002550 OS=Sorghum bicolor GN=Sb02g002550 PE=4 SV=1 |
| 1341 | gnl|citrus|GI1478W01DECKP | B4FZP8 | 6.79197e-22 | B4FZP8_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 |
| 1342 | gnl|citrus|GI1478W01DEFDN | A5B3Q9 | 2.5039e-14 | A5B3Q9_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_000676 PE=4 SV=1 |
| 1343 | gnl|citrus|GI1478W01DEMGI | B9HF47 | 2.42526e-25 | B9HF47_POPTR Sodium proton exchanger OS=Populus trichocarpa GN=POPTRDRAFT_562521 PE=4 SV=1 |
| 1344 | gnl|citrus|GI1478W01DEOSI | C0P546 | 3.21962e-17 | C0P546_MAIZE Putative uncharacterized protein OS=Zea mays PE=2 SV=1 |
| 1345 | gnl|citrus|GI1478W01DEQWJ | B6T724 | 8.84141e-09 | B6T724_MAIZE Acyl-CoA-binding domain-containing protein 6 OS=Zea mays PE=2 SV=1 |
| 1346 | gnl|citrus|GI1478W01DF0PN | A9S9D1 | 8.98539e-21 | A9S9D1_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_126249 PE=4 SV=1 |
| 1347 | gnl|citrus|GI1478W01DF2XF | A0JJY8 | 4.51979e-07 | A0JJY8_AGATE Pol domain (Fragment) OS=Agave tequilana GN=rnaseH PE=4 SV=1 |
| 1348 | gnl|citrus|GI1478W01DF7HE | D3HUK9 | 7.23028e-20 | D3HUK9_VITVI Pathogenesis-related protein 10.4 (Fragment) OS=Vitis vinifera GN=pr10.4 PE=2 SV=1 |
| 1349 | gnl|citrus|GI1478W01DFBJJ | A5AXV9 | 1.09526e-50 | A5AXV9_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_041487 PE=4 SV=1 |
| 1350 | gnl|citrus|GI1478W01DFCC9 | B9IE47 | 5.95119e-15 | B9IE47_POPTR Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_835091 PE=4 SV=1 |
Check here for the sequence database, sample table of citrus candidate genes, and other data.
